A critical comparison of technologies for a plant genome sequencing project

bioRxiv 2017

Paajanen P et al

 

 

The genome of Chenopodium quinoa

Nature 2017

Jarvis D et al

 

 

 

 

 

 

 

 

 

 

Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula

BMC Genomics 2017

Moll et al

 

Rapid cloning of genes in hexaploid wheat using cultivar-specific long-range chromosome assembly

Nature Biotechnology 2017

Krattinger S et al

 

Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce

Nature Communications 2017

Michelmore R et al

 

De novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species

Nature Scientific Reports 2017

Pootakham W et al

 

Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling

Genome Research 2017

Green R et al

 

Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data

Genome Research 2017

Schneeberger K et al

 

The impact of third generation genomic technologies on plant genome assembly

Current Opinion in Plant Biology 2017

Jaio W and Scheeberger K

 

The house spider genome reveals an ancient whole-genome duplication during arachnid evolution

BioRxiv 2017

McGregor A et al

 

 

 

 

Genome evolution in the allotetraploid frog Xenopus laevis

Nature 2016

Rokshar D et al

 

 

 

 

 

 

 

 

 

Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity

Nature Biotechnology 2016

Rokshar D et al

 

Chromosome-scale shotgun assembly using an in-vitro method for long-range linkage

Genome Research 2016

Putnam N et al